Research workbench
The ensemble of the solution global structures of the 102-nt ribosome binding structure element of the turnip crinkle virus 3' utr RNA
Analyse The ensemble of the solution global structures of the 102-nt ribosome binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KRL
- Type
- RNA
- Length
- 102 nucleotides
- Chains
- 1
- Method
- solution nmr; solution scattering
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (102-mer)
- Pockets
- 2 · best druggability 0.54
Structure
solution nmr; solution scattering · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (102-mer) | rna | 102 | — | — |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 383 | 0.54 | 0.74 | 23 | empty |
| 2 | 149 | 0.40 | 0.74 | 13 | empty |
Compared structures
- 2KRL · The ensemble of the solution global structures of the 102-nt ribosome binding structure… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2KRL · PDBe 2KRL
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.