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Solution structure of the major allergen of artemisia vulgaris (art V 1)

Analyse Solution structure of the major allergen of artemisia vulgaris (art V 1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2KPY
Type: protein
Length: 108 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Major pollen allergen art V 1
UniProt: Q84ZX5
Pockets: 1 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 9% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Major pollen allergen art V 1	protein	108	9% helix, 21% strand	Q84ZX5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.32	0.74	20	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

2KPY · Solution Structure of the major allergen of Artemisia vulgaris (Art v 1) · the same entry in another collection · chain A against A, TM-score 1.00
Q84ZX5 · AlphaFold monomer V2.0 prediction for major pollen allergen art V 1 (Q84ZX5) · a predicted model of the same protein · chain A against A, TM-score 0.40

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q84ZX5
Elsewhere: RCSB PDB 2KPY · PDBe 2KPY · UniProt Q84ZX5

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