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Spatial structure of the dimeric transmembrane domain of glycophorin a in bicelles soluton

Analyse Spatial structure of the dimeric transmembrane domain of glycophorin a in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2KPF
Type
protein
Length
76 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Glycophorin-a
UniProt
P02724

Structure

solution nmr · 1 distinct chain · 63% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BGlycophorin-aprotein3863% helix, 0% strandP02724

Interfaces

1 interface between chains.

  • A–B · 507 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 2KPF · Spatial structure of the dimeric transmembrane domain of glycophorin A in bicelles soluton · the same entry in another collection · chain A against A, TM-score 1.00
  • P02724 · AlphaFold monomer V2.0 prediction for glycophorin-a (P02724) · a predicted model of the same protein · chain A against A, TM-score 0.62

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