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PSB27 structure from synechocystis

Analyse PSB27 structure from synechocystis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2KND
Type: protein
Length: 110 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Photosystem II 11 kda protein
UniProt: P74367
Pockets: 2 · best druggability 0.49

Structure

solution nmr · 1 distinct chain · 62% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Photosystem II 11 kda protein	protein	110	62% helix, 0% strand	P74367

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.49	0.86	16	empty
2	53	0.45	0.84	12	empty

Compared structures

2KND · Psb27 structure from Synechocystis · the same entry in another collection · chain A against A, TM-score 1.00
P74367 · AlphaFold monomer V2.0 prediction for photosystem II lipoprotein PSB27 (P74367) · a predicted model of the same protein · chain A against A, TM-score 0.63

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P74367
Elsewhere: RCSB PDB 2KND · PDBe 2KND · UniProt P74367

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