Research workbench
Solution structure of the second domain of the listeria protein LIN2157, northeast structural genomics consortium target LKR136B
Analyse Solution structure of the second domain of the listeria protein LIN2157… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KJK
- Type
- protein
- Length
- 100 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LIN2157 protein
- UniProt
- Q929W6
- Pockets
- 2 · best druggability 0.37
Structure
solution nmr · 1 distinct chain · 10% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | LIN2157 protein | protein | 100 | 10% helix, 35% strand | Q929W6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.37 | 0.80 | 17 | empty |
| 2 | 81 | 0.36 | 0.76 | 17 | empty |
Compared structures
- 2KJK · Solution structure of the second domain of the listeria protein Lin2157, Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q929W6
- Elsewhere: RCSB PDB 2KJK · PDBe 2KJK · UniProt Q929W6
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