Research workbench
Solution structure of yeast PRP24-RRM2 bound to a fragment of U6 RNA
Analyse Solution structure of yeast PRP24-RRM2 bound to a fragment of U6 RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KH9
- Type
- protein + RNA
- Length
- 92 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- U4/U6 snrna-associated-splicing factor PRP24; 5'-R(*AP*GP*AP*GP*AP*U)-3'
- UniProt
- P49960
Structure
solution nmr · 2 distinct chains · 24% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U4/U6 snrna-associated-splicing factor PRP24 | protein | 86 | 24% helix, 27% strand | P49960 |
| B | 5'-R(*AP*GP*AP*GP*AP*U)-3' | rna | 6 | — | — |
Interfaces
1 interface between chains.
- A–B · 631 Ų buried · 19 hydrogen bonds · protein-nucleic
Compared structures
- 2KH9 · Solution structure of yeast Prp24-RRM2 bound to a fragment of U6 RNA · the same entry in another collection · chain A against A, TM-score 1.00
- P49960 · AlphaFold monomer V2.0 prediction for U4/U6 snrna-associated-splicing factor PRP24… · a predicted model of the same protein · chain A against A, TM-score 0.71
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49960
- Elsewhere: RCSB PDB 2KH9 · PDBe 2KH9 · UniProt P49960
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