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Structure of sdf-1/CXCL12

Analyse Structure of sdf-1/CXCL12 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2KEC
Type: protein
Length: 68 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Stromal cell-derived factor 1-alpha
UniProt: P48061

Structure

solution nmr · 1 distinct chain · 22% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Stromal cell-derived factor 1-alpha	protein	68	22% helix, 29% strand	P48061

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2KEC · Structure of SDF-1/CXCL12 · the same entry in another collection · chain A against A, TM-score 1.00
P48061 · AlphaFold monomer V2.0 prediction for stromal cell-derived factor 1 (P48061) · a predicted model of the same protein · chain A against A, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P48061
Elsewhere: RCSB PDB 2KEC · PDBe 2KEC · UniProt P48061

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