Research workbench
Solution structure of harmonin PDZ2 in complex with the carboxyl tail peptide of CADHERIN23
Analyse Solution structure of harmonin PDZ2 in complex with the carboxyl tail peptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KBS
- Type
- protein
- Length
- 100 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Harmonin; Octameric peptide from cadherin-23
- UniProt
- Q9Y6N9, Q9H251
Structure
solution nmr · 2 distinct chains · 19% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Harmonin | protein | 92 | 21% helix, 33% strand | Q9Y6N9 |
| B | Octameric peptide from cadherin-23 | protein | 8 | 0% helix, 38% strand | Q9H251 |
Interfaces
1 interface between chains.
- A–B · 478 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 2KBS · Solution structure of harmonin PDZ2 in complex with the carboxyl tail peptide of… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y6N9 · AlphaFold monomer V2.0 prediction for harmonin (Q9Y6N9) · a predicted model of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6N9
- Every structure of UniProt Q9H251
- Elsewhere: RCSB PDB 2KBS · PDBe 2KBS · UniProt Q9Y6N9 · UniProt Q9H251
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