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Dimeric solution structure of the DNA loop D(TGCTTCGT)

Analyse Dimeric solution structure of the DNA loop D(TGCTTCGT) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2K90
Type
DNA
Length
16 nucleotides
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
5'-D(*TP*GP*CP*TP*TP*CP*GP*T)-3'

Structure

solution nmr · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B5'-D(*TP*GP*CP*TP*TP*CP*GP*T)-3'dna8——

Interfaces

1 interface between chains.

  • A–B · 382 Ų buried · 34 hydrogen bonds · nucleic-nucleic

Compared structures

  • 2K90 · Dimeric solution structure of the DNA loop d(TGCTTCGT) · the same entry in another collection · chain A against A, TM-score 1.00

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