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Solution structure of the PPIL1 bound to a fragment of skip

Analyse Solution structure of the PPIL1 bound to a fragment of skip in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2K7N
Type: protein
Length: 203 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Peptidyl-prolyl cis-trans isomerase-like 1
EC: 5.2.1.8
UniProt: Q9Y3C6
Pockets: 1 · best druggability 0.49

Structure

solution nmr · 1 distinct chain · 11% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Peptidyl-prolyl cis-trans isomerase-like 1 (EC 5.2.1.8)	protein	203	11% helix, 28% strand	Q9Y3C6

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	113	0.49	0.80	17	empty

Compared structures

2K7N · Solution structure of the PPIL1 bound to a fragment of SKIP · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y3C6 · AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase-like 1 (Q9Y3C6) · a predicted model of the same protein · chain A against A, TM-score 0.70

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y3C6
Elsewhere: RCSB PDB 2K7N · PDBe 2K7N · UniProt Q9Y3C6

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