Research workbench
NMR structure of VPS4A-mit-CHMP6
Analyse NMR structure of VPS4A-mit-CHMP6 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2K3W
- Type
- protein
- Length
- 85 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Vacuolar protein sorting-associating protein 4A; Charged multivesicular body protein 6
- UniProt
- Q9UN37, Q96FZ7
Structure
solution nmr · 2 distinct chains · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein sorting-associating protein 4A | protein | 73 | 86% helix, 0% strand | Q9UN37 |
| B | Charged multivesicular body protein 6 | protein | 12 | 0% helix, 0% strand | Q96FZ7 |
Interfaces
1 interface between chains.
- A–B · 687 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 2K3W · NMR structure of VPS4A-MIT-CHMP6 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UN37 · AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated protein 4A… · a predicted model of the same protein · chain A against A, TM-score 0.94
- Q96FZ7 · AlphaFold monomer V2.0 prediction for charged multivesicular body protein 6 (Q96FZ7) · a predicted model of the same protein · chain B against A, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UN37
- Every structure of UniProt Q96FZ7
- Elsewhere: RCSB PDB 2K3W · PDBe 2K3W · UniProt Q9UN37 · UniProt Q96FZ7
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