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Solution structure of the complex of ubiquitin and ubiquilin 1 uba domain

Analyse Solution structure of the complex of ubiquitin and ubiquilin 1 uba domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JY6
Type: protein
Length: 128 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ubiquitin protein; Ubiquilin-1
UniProt: Q96H31, Q9UMX0

Structure

solution nmr · 2 distinct chains · 32% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ubiquitin protein	protein	76	18% helix, 36% strand	Q96H31
B	Ubiquilin-1	protein	52	52% helix, 0% strand	Q9UMX0

Interfaces

1 interface between chains.

A–B · 570 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

2JY6 · Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain · the same entry in another collection · chain A against A, TM-score 1.00
Q9UMX0 · AlphaFold monomer V2.0 prediction for ubiquilin-1 (Q9UMX0) · a predicted model of the same protein · chain B against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96H31
Every structure of UniProt Q9UMX0
Elsewhere: RCSB PDB 2JY6 · PDBe 2JY6 · UniProt Q96H31 · UniProt Q9UMX0

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