Research workbench
Solution structure of periplasmic domain of tolr from H. influenzae with saxs data
Analyse Solution structure of periplasmic domain of tolr from H. influenzae with saxs… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JWL
- Type
- protein
- Length
- 148 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein tolr
- UniProt
- P43769
- Pockets
- 1 · best druggability 0.46
Structure
solution nmr · 1 distinct chain · 36% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein tolr | protein | 74 | 36% helix, 28% strand | P43769 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 196 | 0.46 | 0.74 | 35 | empty |
Interfaces
1 interface between chains.
- A–B · 881 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 2JWL · Solution Structure of periplasmic domain of TolR from H. influenzae with SAXS data · the same entry in another collection · chain A against A, TM-score 1.00
- P43769 · AlphaFold monomer V2.0 prediction for tol-pal system protein tolr (P43769) · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P43769
- Elsewhere: RCSB PDB 2JWL · PDBe 2JWL · UniProt P43769
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