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Solution structure of the periplasmic domain of tolr from haemophilus influenzae

Analyse Solution structure of the periplasmic domain of tolr from haemophilus influenzae in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JWK
Type: protein
Length: 148 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein tolr
UniProt: P43769
Pockets: 1 · best druggability 0.27

Structure

solution nmr · 1 distinct chain · 36% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein tolr	protein	74	36% helix, 28% strand	P43769

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	64	0.27	0.72	20	empty

Interfaces

1 interface between chains.

A–B · 871 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

2JWK · Solution Structure of the periplasmic domain of TolR from Haemophilus influenzae · the same entry in another collection · chain A against A, TM-score 1.00
P43769 · AlphaFold monomer V2.0 prediction for tol-pal system protein tolr (P43769) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P43769
Elsewhere: RCSB PDB 2JWK · PDBe 2JWK · UniProt P43769

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