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Structure of a glycosylphosphatidylinositol-anchored domain from a trypanosome variant surface glycoprotein

Analyse Structure of a glycosylphosphatidylinositol-anchored domain from a trypanosome… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2JWG
Type
protein
Length
46 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Variant surface glycoprotein iltat 1.24
UniProt
P26329

Structure

solution nmr · 1 distinct chain · 33% helix, 13% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AVariant surface glycoprotein iltat 1.24protein4633% helix, 13% strandP26329

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 2JWG · Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant… · the same entry in another collection · chain A against A, TM-score 1.00
  • P26329 · AlphaFold monomer V2.0 prediction for variant surface glycoprotein iltat 1.24 (P26329) · a predicted model of the same protein · chain A against A, TM-score 0.79

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