Research workbench
NMR structure of protein Q6N9A4_RHOPA. northeast structural genomics consortium target RPT8
Analyse NMR structure of protein Q6N9A4_RHOPA. northeast structural genomics consortium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JS3
- Type
- protein
- Length
- 192 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q6N9A4
- Pockets
- 3 · best druggability 0.57
Structure
solution nmr · 1 distinct chain · 25% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Uncharacterized protein | protein | 96 | 25% helix, 16% strand | Q6N9A4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 259 | 0.57 | 0.78 | 39 | empty |
| 2 | 51 | 0.44 | 0.83 | 19 | empty |
| 3 | 149 | 0.42 | 0.75 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 937 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 2JS3 · NMR Structure of protein Q6N9A4_RHOPA. Northeast Structural Genomics Consortium target… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6N9A4
- Elsewhere: RCSB PDB 2JS3 · PDBe 2JS3 · UniProt Q6N9A4
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