Research workbench
Solution structure of the BRIGHT/ARID domain from the human JARID1C protein.
Analyse Solution structure of the BRIGHT/ARID domain from the human JARID1C protein. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JRZ
- Type
- protein
- Length
- 117 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histone demethylase JARID1C
- EC
- 1.14.11.-
- UniProt
- P41229
- Pockets
- 1 · best druggability 0.48
Structure
solution nmr · 1 distinct chain · 60% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone demethylase JARID1C (EC 1.14.11.-) | protein | 117 | 60% helix, 3% strand | P41229 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.48 | 0.79 | 22 | empty |
Compared structures
- 2JRZ · Solution structure of the Bright/ARID domain from the human JARID1C protein. · the same entry in another collection · chain A against A, TM-score 1.00
- P41229 · AlphaFold monomer V2.0 prediction for lysine-specific demethylase 5C (P41229) · a predicted model of the same protein · chain A against A, TM-score 0.72
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41229
- Elsewhere: RCSB PDB 2JRZ · PDBe 2JRZ · UniProt P41229
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