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Solution structure of the alternative conformation of XCL1/LYMPHOTACTIN

Analyse Solution structure of the alternative conformation of XCL1/LYMPHOTACTIN in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JP1
Type: protein
Length: 120 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lymphotactin
UniProt: P47992
Pockets: 1 · best druggability 0.31

Structure

solution nmr · 1 distinct chain · 0% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Lymphotactin	protein	60	0% helix, 45% strand	P47992

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	66	0.31	0.74	19	empty

Interfaces

1 interface between chains.

A–B · 1359 Å² buried · 17 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2JP1 · Solution structure of the alternative conformation of XCL1/Lymphotactin · the same entry in another collection · chain A against A, TM-score 1.00
P47992 · AlphaFold monomer V2.0 prediction for lymphotactin (P47992) · a predicted model of the same protein · chain A against A, TM-score 0.35

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P47992
Elsewhere: RCSB PDB 2JP1 · PDBe 2JP1 · UniProt P47992

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