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NMR solution structure, stability, and interaction of the recombinant bovine fibrinogen alphac-domain fragment

Analyse NMR solution structure, stability, and interaction of the recombinant bovine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JOR
Type: protein
Length: 79 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fibrinogen alpha chain
UniProt: P02672
Pockets: 1 · best druggability 0.34

Structure

solution nmr · 1 distinct chain · 0% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fibrinogen alpha chain	protein	79	0% helix, 28% strand	P02672

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	83	0.34	0.74	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2JOR · NMR Solution Structure, Stability, and Interaction of the Recombinant Bovine Fibrinogen… · the same entry in another collection · chain A against A, TM-score 1.00
P02672 · AlphaFold monomer V2.0 prediction for fibrinogen alpha chain (P02672) · a predicted model of the same protein · chain A against A, TM-score 0.28

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02672
Elsewhere: RCSB PDB 2JOR · PDBe 2JOR · UniProt P02672

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