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Average NMR structure of the catalytic domain of guanine nucleotide exchange factor bope from burkholderia pseudomallei

Analyse Average NMR structure of the catalytic domain of guanine nucleotide exchange… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JOL
Type: protein
Length: 184 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative G-nucleotide exchange factor
UniProt: Q63K41
Pockets: 1 · best druggability 0.67

Structure

solution nmr · 1 distinct chain · 73% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative G-nucleotide exchange factor	protein	184	73% helix, 3% strand	Q63K41

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.67	0.96	17	empty

Compared structures

2JOL · Average NMR structure of the catalytic domain of guanine nucleotide exchange factor BopE… · the same entry in another collection · chain A against A, TM-score 1.00
Q63K41 · AlphaFold monomer V2.0 prediction for guanine nucleotide exchange factor bope (Q63K41) · a predicted model of the same protein · chain A against A, TM-score 0.72

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q63K41
Elsewhere: RCSB PDB 2JOL · PDBe 2JOL · UniProt Q63K41

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