Research workbench
NMR structure of the catalytic domain of guanine nucleotide exchange factor bope from burkholderia pseudomallei
Analyse NMR structure of the catalytic domain of guanine nucleotide exchange factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JOK
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative G-nucleotide exchange factor
- UniProt
- Q63K41
- Pockets
- 1 · best druggability 0.62
Structure
solution nmr · 1 distinct chain · 68% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative G-nucleotide exchange factor | protein | 184 | 68% helix, 3% strand | Q63K41 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 297 | 0.62 | 0.80 | 31 | empty |
Compared structures
- 2JOK · NMR structure of the catalytic domain of guanine nucleotide exchange factor BopE from… · the same entry in another collection · chain A against A, TM-score 1.00
- Q63K41 · AlphaFold monomer V2.0 prediction for guanine nucleotide exchange factor bope (Q63K41) · a predicted model of the same protein · chain A against A, TM-score 0.70
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63K41
- Elsewhere: RCSB PDB 2JOK · PDBe 2JOK · UniProt Q63K41
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