Research workbench
The solution structure of the monomeric species of the C terminal domain of the ca protein of HIV-1
Analyse The solution structure of the monomeric species of the C terminal domain of the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JO0
- Type
- protein
- Length
- 87 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gag-pol polyprotein
- EC
- 3.4.23.16
- UniProt
- P35963
- Pockets
- 2 · best druggability 0.30
Structure
solution nmr · 1 distinct chain · 38% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gag-pol polyprotein (EC 3.4.23.16) | protein | 87 | 38% helix, 0% strand | P35963 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.30 | 0.73 | 21 | empty |
| 2 | 55 | 0.29 | 0.75 | 19 | empty |
Compared structures
- 2JO0 · The solution structure of the monomeric species of the C terminal domain of the CA… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35963
- Elsewhere: RCSB PDB 2JO0 · PDBe 2JO0 · UniProt P35963
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.