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Solution structure of RNA-binding protein 15.5K

Analyse Solution structure of RNA-binding protein 15.5K in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JNB
Type: protein
Length: 128 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NHP2-like protein 1
UniProt: P55769
Pockets: 2 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 43% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NHP2-like protein 1	protein	128	43% helix, 13% strand	P55769

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.32	0.76	14	empty
2	63	0.30	0.74	13	empty

Compared structures

2JNB · Solution Structure of RNA-binding protein 15.5K · the same entry in another collection · chain A against A, TM-score 1.00
P55769 · AlphaFold monomer V2.0 prediction for NHP2-like protein 1 (P55769) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55769
Elsewhere: RCSB PDB 2JNB · PDBe 2JNB · UniProt P55769

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