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Solution NMR structure of salmonella typhimurium LT2 secreted protein STM0082: northeast structural genomics consortium target STR109
Analyse Solution NMR structure of salmonella typhimurium LT2 secreted protein STM0082… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JNA
- Type
- protein
- Length
- 208 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative secreted protein
- UniProt
- Q7CR88
- Pockets
- 3 · best druggability 0.56
Structure
solution nmr · 1 distinct chain · 22% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Putative secreted protein | protein | 104 | 22% helix, 30% strand | Q7CR88 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 288 | 0.56 | 0.76 | 29 | empty |
| 2 | 247 | 0.51 | 0.76 | 27 | empty |
| 3 | 57 | 0.37 | 0.80 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 2027 Ų buried · 39 hydrogen bonds · protein-protein
Compared structures
- 2JNA · Solution NMR Structure of Salmonella typhimurium LT2 Secreted Protein STM0082: Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7CR88
- Elsewhere: RCSB PDB 2JNA · PDBe 2JNA · UniProt Q7CR88
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