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Crystal structure of the the bradyzoite specific antigen BSR4 from toxoplasma gondii.
Analyse Crystal structure of the the bradyzoite specific antigen BSR4 from toxoplasma… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JKS
- Type
- protein
- Length
- 284 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bradyzoite surface antigen BSR4
- UniProt
- Q95NL6
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.34
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bradyzoite surface antigen BSR4 | protein | 284 | 7% helix, 44% strand | Q95NL6 |
Ligands and binding sites
- ZN · Zinc ion · metal · 8 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.34 | 0.79 | 14 | empty |
| 2 | 64 | 0.27 | 0.73 | 18 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Compared structures
- 2JKS · Crystal structure of the the bradyzoite specific antigen BSR4 from toxoplasma gondii. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95NL6
- Elsewhere: RCSB PDB 2JKS · PDBe 2JKS · UniProt Q95NL6
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