Research workbench
Native family 12 xyloglucanase from bacillus licheniformis
Analyse Native family 12 xyloglucanase from bacillus licheniformis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JEM
- Type
- protein
- Length
- 464 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Endo-beta-1,4-glucanase
- EC
- 3.2.1.4, 3.2.1.151
- UniProt
- Q7X4S4
- Pockets
- 2 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Endo-beta-1,4-glucanase (EC 3.2.1.4, 3.2.1.151) | protein | 232 | 6% helix, 55% strand | Q7X4S4 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 133 | 0.45 | 0.77 | 23 | empty |
| 2 | 126 | 0.44 | 0.76 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 615 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 2JEM · Native family 12 xyloglucanase from Bacillus licheniformis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7X4S4
- Elsewhere: RCSB PDB 2JEM · PDBe 2JEM · UniProt Q7X4S4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.