Research workbench
Cytochrome P460 from nitrosomonas europaea - probable nonphysiological oxidized form
Analyse Cytochrome P460 from nitrosomonas europaea - probable nonphysiological oxidized… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JE2
- Type
- protein
- Length
- 157 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cytochrome P460
- UniProt
- Q50927
- Ligands
- HEC, PO4
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytochrome P460 | protein | 157 | 22% helix, 37% strand | Q50927 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.53 | 0.82 | 24 | HEC, PO4 |
Modifications
Observed in the structure: 3 cofactor (heme c attachment).
Compared structures
- 2JE2 · Cytochrome P460 from Nitrosomonas europaea - probable nonphysiological oxidized form · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q50927
- Elsewhere: RCSB PDB 2JE2 · PDBe 2JE2 · UniProt Q50927
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