Research workbench

Chicken B-myb DNA binding domain, repeat 2 and REPEAT3, NMR, 32 structures

Analyse Chicken B-myb DNA binding domain, repeat 2 and REPEAT3, NMR, 32 structures in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1A5J
Type: protein
Length: 110 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: B-myb
UniProt: Q03237
Pockets: 1 · best druggability 0.33

Structure

solution nmr · 1 distinct chain · 45% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	B-myb	protein	110	45% helix, 0% strand	Q03237

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	65	0.33	0.77	17	empty

Compared structures

1A5J · Chicken B-myb DNA binding domain, repeat 2 and REPEAT3, NMR, 32 structures · the same entry in another collection · chain A against A, TM-score 1.00
Q03237 · AlphaFold monomer V2.0 prediction for myb-related protein B (Q03237) · a predicted model of the same protein · chain A against A, TM-score 0.40

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q03237
Elsewhere: RCSB PDB 1A5J · PDBe 1A5J · UniProt Q03237

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