Research workbench
Crystal structure of deletion mutant delta 228-252 R190A of the single-stranded DNA binding protein from thermus aquaticus
Analyse Crystal structure of deletion mutant delta 228-252 R190A of the single-stranded… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2IHF
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Single-stranded DNA-binding protein
- UniProt
- Q9KH06
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Single-stranded DNA-binding protein | protein | 205 | 6% helix, 57% strand | Q9KH06 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.41 | 0.75 | 20 | empty |
| 2 | 71 | 0.34 | 0.76 | 20 | empty |
Compared structures
- 2IHF · Crystal structure of deletion mutant delta 228-252 R190A of the single-stranded DNA… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9KH06 · AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein (Q9KH06) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KH06
- Elsewhere: RCSB PDB 2IHF · PDBe 2IHF · UniProt Q9KH06
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