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Crystal structure of a protein of unknown function PA3499 from pseudomonas aeruginosa

Analyse Crystal structure of a protein of unknown function PA3499 from pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2IG8
Type: protein
Length: 427 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein PA3499
UniProt: Q9HYB0
Pockets: 4 · best druggability 0.68

Structure

x-ray diffraction · 2 distinct chains · 32% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	Hypothetical protein PA3499	protein	142	32% helix, 26% strand	Q9HYB0
B	Hypothetical protein PA3499	protein	143	32% helix, 25% strand	Q9HYB0

Pockets

4 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	328	0.68	0.82	29	empty
2	303	0.66	0.81	28	empty
3	244	0.66	0.83	27	empty
4	296	0.65	0.81	29	empty

Interfaces

3 interfaces between chains.

A–C · 1222 Å² buried · 21 hydrogen bonds · protein-protein
B–C · 1175 Å² buried · 23 hydrogen bonds · protein-protein
A–B · 1161 Å² buried · 22 hydrogen bonds · protein-protein

Compared structures

2IG8 · Crystal structure of a Protein of Unknown Function PA3499 from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HYB0
Elsewhere: RCSB PDB 2IG8 · PDBe 2IG8 · UniProt Q9HYB0

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