Research workbench
Solution structure of cecropin A(1-8)-magainin 2(1-12) hybrid peptide ANALOGUE(P3)
Analyse Solution structure of cecropin A(1-8)-magainin 2(1-12) hybrid peptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1D9O
- Type
- protein
- Length
- 20 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cecropin A(1-8)-magainin 2 hybrid peptide analogue
- UniProt
- P01507, P11006
- Ligands
- NH2
Structure
solution nmr · 1 distinct chain · 40% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cecropin A(1-8)-magainin 2 hybrid peptide analogue | protein | 20 | 40% helix, 0% strand | P01507, P11006 |
Ligands and binding sites
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1D9O · Solution structure of cecropin A(1-8)-magainin 2(1-12) hybrid peptide ANALOGUE(P3) · the same entry in another collection · chain A against A, TM-score 1.00
- P01507 · AlphaFold monomer V2.0 prediction for cecropin-a (P01507) · a predicted model of the same protein · chain A against A, TM-score 0.36
- P11006 · AlphaFold monomer V2.0 prediction for magainins (P11006) · a predicted model of the same protein · chain A against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01507
- Every structure of UniProt P11006
- Elsewhere: RCSB PDB 1D9O · PDBe 1D9O · UniProt P01507 · UniProt P11006
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.