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Crystal structure of a sec-C motif containing protein (PSYC_2064) from psychrobacter arcticus at 1.75 a resolution
Analyse Crystal structure of a sec-C motif containing protein (PSYC_2064) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2I9W
- Type
- protein
- Length
- 177 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein
- UniProt
- Q4FPZ7
- Ligands
- ZN, CL
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein | protein | 177 | 33% helix, 27% strand | Q4FPZ7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.56 | 0.79 | 28 | empty |
| 2 | 55 | 0.43 | 0.82 | 15 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 2I9W · Crystal structure of a sec-c motif containing protein (psyc_2064) from psychrobacter… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4FPZ7
- Elsewhere: RCSB PDB 2I9W · PDBe 2I9W · UniProt Q4FPZ7
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