Research workbench

Bovine interferon-gamma at 2.9 ångströms

Analyse Bovine interferon-gamma at 2.9 ångströms in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1D9G
Type: protein
Length: 232 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Interferon-gamma
UniProt: P07353
Pockets: 2 · best druggability 0.57

Structure

x-ray diffraction · 2 distinct chains · 72% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Interferon-gamma	protein	121	69% helix, 0% strand	P07353
B	Interferon-gamma	protein	111	76% helix, 0% strand	P07353

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.57	0.85	22	empty
2	77	0.35	0.75	15	empty

Interfaces

1 interface between chains.

A–B · 3567 Å² buried · 44 hydrogen bonds · protein-protein

Compared structures

1D9G · Bovine interferon-gamma at 2.9 ångströms · the same entry in another collection · chain A against A, TM-score 1.00
P07353 · AlphaFold monomer V2.0 prediction for interferon gamma (P07353) · a predicted model of the same protein · chain B against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07353
Elsewhere: RCSB PDB 1D9G · PDBe 1D9G · UniProt P07353

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