Research workbench
Crystal structure of brassica napus enoyl acyl carrier protein reductase complexed with NAD and triclosan
Analyse Crystal structure of brassica napus enoyl acyl carrier protein reductase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1D7O
- Type
- protein
- Length
- 297 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Enoyl-[acyl-carrier protein] reductase (NADH) precursor
- EC
- 1.3.1.9
- UniProt
- P80030
- Ligands
- NAD, TCL
- Pockets
- 2 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Enoyl-[acyl-carrier protein] reductase (NADH) precursor (EC 1.3.1.9) | protein | 297 | 45% helix, 17% strand | P80030 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 505 | 0.66 | 0.77 | 46 | NAD, TCL |
| 2 | 116 | 0.50 | 0.81 | 21 | empty |
Compared structures
- 1D7O · Crystal structure of brassica napus enoyl acyl carrier protein reductase complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
- P80030 · AlphaFold monomer V2.0 prediction for enoyl-[acyl-carrier-protein] reductase [NADH]… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80030
- Elsewhere: RCSB PDB 1D7O · PDBe 1D7O · UniProt P80030
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