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Bovine odorant binding protein deswapped triple mutant

Analyse Bovine odorant binding protein deswapped triple mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2HLV
Type: protein
Length: 149 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Odorant-binding protein
UniProt: P07435
Ligands: LIK
Pockets: 1 · best druggability 0.85

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Odorant-binding protein	protein	149	13% helix, 48% strand	P07435

Ligands and binding sites

LIK · 3,6-bis(methylene)decanoic acid · ligand · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	176	0.85	0.99	22	LIK

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2HLV · Bovine Odorant Binding Protein deswapped triple mutant · the same entry in another collection · chain A against A, TM-score 1.00
P07435 · AlphaFold monomer V2.0 prediction for odorant-binding protein (P07435) · a predicted model of the same protein · chain A against A, TM-score 0.75

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07435
Elsewhere: RCSB PDB 2HLV · PDBe 2HLV · UniProt P07435

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