Research workbench
Solution NMR structure of the ydfo protein from escherichia COLI. northeast structural genomics target ER251.
Analyse Solution NMR structure of the ydfo protein from escherichia COLI. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2HH8
- Type
- protein
- Length
- 127 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein ydfo
- UniProt
- P76156
- Pockets
- 2 · best druggability 0.39
Structure
solution nmr · 1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein ydfo | protein | 127 | 38% helix, 24% strand | P76156 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.39 | 0.80 | 14 | empty |
| 2 | 67 | 0.34 | 0.76 | 16 | empty |
Compared structures
- 2HH8 · Solution NMR structure of the ydfO protein from Escherichia coli. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P76156 · AlphaFold monomer V2.0 prediction for uncharacterized protein ydfo (P76156) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P76156
- Elsewhere: RCSB PDB 2HH8 · PDBe 2HH8 · UniProt P76156
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