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The X-ray crystal structure of murine OX40L

Analyse The X-ray crystal structure of murine OX40L in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2HEW
Type: protein
Length: 128 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tumor necrosis factor ligand superfamily member 4
UniProt: P43488
Ligands: NAG, SO4

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
F	Tumor necrosis factor ligand superfamily member 4	protein	128	5% helix, 52% strand	P43488

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains F
SO4 · Sulfate ion · ion · chains F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

2HEW · The X-ray crystal structure of murine OX40L · the same entry in another collection · chain F against F, TM-score 1.00
P43488 · AlphaFold monomer V2.0 prediction for tumor necrosis factor ligand superfamily member 4… · a predicted model of the same protein · chain F against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P43488
Elsewhere: RCSB PDB 2HEW · PDBe 2HEW · UniProt P43488

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