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Chalcone synthase C164A mutant

Analyse Chalcone synthase C164A mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1D6F
Type
protein
Length
389 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Chalcone synthase
EC
2.3.1.74
UniProt
P30074
Ligands
SO4
Pockets
1 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AChalcone synthase (EC 2.3.1.74)protein38943% helix, 22% strandP30074

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains A
  • B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
13450.730.8548B3P

Compared structures

  • 1D6F · Chalcone synthase C164A mutant · the same entry in another collection · chain A against A, TM-score 1.00
  • P30074 · AlphaFold monomer V2.0 prediction for chalcone synthase 2 (P30074) · a predicted model of the same protein · chain A against A, TM-score 0.99

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