Research workbench
Solution structure of [D(ATGAGCGAATA)]2: adjacent G:A mismatches stabilized by cross-strand base-stacking and bii phosphate groups
Analyse Solution structure of [D(ATGAGCGAATA)]2: adjacent G:A mismatches stabilized by… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1D69
- Type
- DNA
- Length
- 20 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(P*AP*TP*GP*AP*GP*CP*GP*AP*AP*TP*A)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(P*AP*TP*GP*AP*GP*CP*GP*AP*AP*TP*A)-3') | dna | 10 | — | — |
Interfaces
1 interface between chains.
- A–B · 639 Ų buried · 42 hydrogen bonds · nucleic-nucleic
Compared structures
- 1D69 · Solution structure of [D(ATGAGCGAATA)]2: adjacent G:A mismatches stabilized by… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1D69 · PDBe 1D69
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