Research workbench
Crystal structure of the archaea specific DNA binding protein
Analyse Crystal structure of the archaea specific DNA binding protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2H9U
- Type
- protein
- Length
- 101 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA/RNA-binding protein alba 2
- UniProt
- Q9YAX2
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA/RNA-binding protein alba 2 | protein | 101 | 27% helix, 41% strand | Q9YAX2 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2H9U · Crystal structure of the archaea specific DNA binding protein · the same entry in another collection · chain A against A, TM-score 1.00
- Q9YAX2 · AlphaFold monomer V2.0 prediction for DNA/RNA-binding protein alba 2 (Q9YAX2) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YAX2
- Elsewhere: RCSB PDB 2H9U · PDBe 2H9U · UniProt Q9YAX2
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