Research workbench
Rational stabilization of E. COLI ribose binding protein
Analyse Rational stabilization of E. COLI ribose binding protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2GX6
- Type
- protein
- Length
- 271 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- D-ribose-binding periplasmic protein
- EC
- 3.6.3.17
- UniProt
- P02925
- Ligands
- RIP
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | D-ribose-binding periplasmic protein (EC 3.6.3.17) | protein | 271 | 45% helix, 21% strand | P02925 |
Ligands and binding sites
- RIP · beta-D-ribopyranose · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2GX6 · Rational stabilization of E. coli ribose binding protein · the same entry in another collection · chain A against A, TM-score 1.00
- P02925 · AlphaFold monomer V2.0 prediction for ribose import binding protein rbsb (P02925) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02925
- Elsewhere: RCSB PDB 2GX6 · PDBe 2GX6 · UniProt P02925
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