Research workbench
Crystal structure of the yeast TOM70
Analyse Crystal structure of the yeast TOM70 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2GW1
- Type
- protein
- Length
- 974 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mitochondrial precursor proteins import receptor
- UniProt
- P07213
- Pockets
- 18 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Mitochondrial precursor proteins import receptor | protein | 487 | 73% helix, 0% strand | P07213 |
Pockets
18 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1130 | 0.80 | 0.81 | 119 | empty |
| 2 | 753 | 0.76 | 0.81 | 73 | empty |
| 3 | 269 | 0.56 | 0.77 | 44 | empty |
| 4 | 221 | 0.55 | 0.77 | 30 | empty |
| 5 | 251 | 0.53 | 0.76 | 40 | empty |
Interfaces
1 interface between chains.
- A–B · 2185 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07213
- Elsewhere: RCSB PDB 2GW1 · PDBe 2GW1 · UniProt P07213
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