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X-ray crystal structure of protein yvfg from bacillus subtilis. northeast structural genomics consortium target SR478.

Analyse X-ray crystal structure of protein yvfg from bacillus subtilis. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2GSV
Type: protein
Length: 135 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein yvfg
UniProt: P71066
Ligands: SO4

Structure

x-ray diffraction · 2 distinct chains · 76% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein yvfg	protein	67	78% helix, 0% strand	P71066
B	Hypothetical protein yvfg	protein	68	75% helix, 0% strand	P71066

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 910 Å² buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

2GSV · X-Ray Crystal Structure of Protein YvfG from Bacillus subtilis. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
P71066 · AlphaFold monomer V2.0 prediction for uncharacterized protein yvfg (P71066) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P71066
Elsewhere: RCSB PDB 2GSV · PDBe 2GSV · UniProt P71066

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