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2.1A crystal structure of salmonella tyhpimurium yeaz, a putative gram-negative rpf, form-a

Analyse 2.1A crystal structure of salmonella tyhpimurium yeaz, a putative gram-negative… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2GEM
Type: protein
Length: 432 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative gram negative resuscitation promoting factor
UniProt: Q7CQE0
Pockets: 2 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Putative gram negative resuscitation promoting factor	protein	216	35% helix, 31% strand	Q7CQE0

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.40	0.81	14	empty
2	56	0.38	0.79	14	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2GEM · 2.1A crystal structure of Salmonella tyhpimurium YeaZ, a putative Gram-negative RPF… · the same entry in another collection · chain A against A, TM-score 1.00
Q7CQE0 · AlphaFold monomer V2.0 prediction for tRNA threonylcarbamoyladenosine biosynthesis… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7CQE0
Elsewhere: RCSB PDB 2GEM · PDBe 2GEM · UniProt Q7CQE0

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