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Structure of protein of unknown function ATU0240 from agrobacteriium tumerfaciencs str. C58

Analyse Structure of protein of unknown function ATU0240 from agrobacteriium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2GAX
Type: protein
Length: 270 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein ATU0240
UniProt: Q8UIQ3
Ligands: PO4
Pockets: 3 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein ATU0240	protein	135	40% helix, 26% strand	Q8UIQ3

Ligands and binding sites

PO4 · Phosphate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	361	0.61	0.77	32	empty
2	78	0.33	0.75	17	empty
3	82	0.33	0.74	15	empty

Interfaces

1 interface between chains.

A–B · 317 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 10 modified (engineered).

Compared structures

2GAX · Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8UIQ3
Elsewhere: RCSB PDB 2GAX · PDBe 2GAX · UniProt Q8UIQ3

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