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Effect of a single 3'-methylene phosphonate linkage on the conformation of an a-DNA octamer double helix

Analyse Effect of a single 3'-methylene phosphonate linkage on the conformation of an… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1D26
Type
DNA
Length
8 nucleotides
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA (5'-D(*GP*CP*CP*CP*(G31)P*GP*GP*C)-3')

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA (5'-D(*GP*CP*CP*CP*(G31)P*GP*GP*C)-3')dna8——

Modifications

Observed in the structure: 1 modified (nucleotide modification).

Compared structures

  • 1D26 · Effect of a single 3'-methylene phosphonate linkage on the conformation of an a-DNA… · the same entry in another collection · chain A against A, TM-score 1.00

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