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Crystal structure of NSP10 from SARS coronavirus

Analyse Crystal structure of NSP10 from SARS coronavirus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2FYG
Type: protein
Length: 128 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Replicase polyprotein 1AB
UniProt: Q6JH39
Ligands: ZN
Pockets: 1 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Replicase polyprotein 1AB	protein	128	29% helix, 13% strand	Q6JH39

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	130	0.46	0.77	18	empty

Compared structures

2FYG · Crystal structure of NSP10 from Sars coronavirus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6JH39
Elsewhere: RCSB PDB 2FYG · PDBe 2FYG · UniProt Q6JH39

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