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Single-stranded DNA-binding protein from thermus aquaticus

Analyse Single-stranded DNA-binding protein from thermus aquaticus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2FXQ
Type: protein
Length: 197 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Single-strand binding protein
UniProt: Q9KH06
Pockets: 1 · best druggability 0.49

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 59% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Single-strand binding protein	protein	197	7% helix, 59% strand	Q9KH06

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	209	0.49	0.75	25	empty

Compared structures

2FXQ · Single-stranded DNA-binding protein from Thermus aquaticus · the same entry in another collection · chain A against A, TM-score 1.00
Q9KH06 · AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein (Q9KH06) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9KH06
Elsewhere: RCSB PDB 2FXQ · PDBe 2FXQ · UniProt Q9KH06

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