Research workbench
Crystal structure of cellular retinoic acid binding protein type II in complex with all-trans-retinoic acid at 1.48 ångströms resolution
Analyse Crystal structure of cellular retinoic acid binding protein type II in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2FR3
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cellular retinoic acid binding protein 2
- UniProt
- P29373
- Ligands
- REA
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 13% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cellular retinoic acid binding protein 2 | protein | 137 | 13% helix, 55% strand | P29373 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 306 | 0.77 | 0.89 | 41 | REA |
Compared structures
- 2FR3 · Crystal Structure of Cellular Retinoic Acid Binding Protein Type II in Complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- P29373 · AlphaFold monomer V2.0 prediction for cellular retinoic acid-binding protein 2 (P29373) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29373
- Elsewhere: RCSB PDB 2FR3 · PDBe 2FR3 · UniProt P29373
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