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Crystal structure of MG2+ and BEF3- bound chey in complex with chez 200-214 solved from a P2(1)2(1)2 crystal grown in mes (pH 6.0)

Analyse Crystal structure of MG2+ and BEF3- bound chey in complex with chez 200-214… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2FMK
Type
protein
Length
143 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Chemotaxis protein chey; C-terminal 15-mer from chemotaxis protein chez
UniProt
P0A2D5, P07800
Ligands
ACE, BEF, MG

Structure

x-ray diffraction · 2 distinct chains · 45% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AChemotaxis protein cheyprotein12843% helix, 19% strandP0A2D5
BC-terminal 15-mer from chemotaxis protein chezprotein1567% helix, 0% strandP07800

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains A, B
  • BEF · Beryllium trifluoride ion · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 538 Ų buried · 6 hydrogen bonds · protein-protein

Compared structures

  • 2FMK · Crystal structure of Mg2+ and BeF3- bound CheY in complex with CheZ 200-214 solved from a… · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A2D5 · AlphaFold monomer V2.0 prediction for chemotaxis protein chey (P0A2D5) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • P07800 · AlphaFold monomer V2.0 prediction for protein phosphatase chez (P07800) · a predicted model of the same protein · chain B against A, TM-score 0.82

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